Deciphering the impact of endoparasitic infection on immune response and gut microbial composition of Channa punctata.

Intestinal parasitic infections caused by helminths are globally distributed and are a major cause of morbidity worldwide. Parasites may modulate the virulence, gut microbiota diversity and host responses during infection. Despite numerous works, little is known about the complex interaction between parasites and the gut microbiota. In the present study, the complex interplay between parasites and the gut microbiota was investigated. A total of 12 bacterial strains across four major families, including Enterobacteriaceae, Morganellaceae, Flavobacteriaceae, and Pseudomonadaceae, were isolated from Channa punctata, infected with the nematode species Aporcella sp., Axonchium sp., Tylencholaimus mirabilis, and Dioctophyme renale. The findings revealed that nematode infection shaped the fish gut bacterial microbiota and significantly affected their virulence levels. Nematode-infected fish bacterial isolates are more likely to be pathogenic, with elevated hemolytic activity and biofilm formation, causing high fish mortality. In contrast, isolates recovered further from non-parasitised C. punctata were observed to be non-pathogenic and had negligible hemolytic activity and biofilm formation. Antibiogram analysis of the bacterial isolates revealed a disproportionately high percentage of bacteria that were either marginally or multidrug resistant, suggesting that parasitic infection-induced stress modulates the gut microenvironment and enables colonization by antibiotic-resistant strains. This isolation-based study provides an avenue to unravel the influence of parasitic infection on gut bacterial characteristics, which is valuable for understanding the infection mechanism and designing further studies aimed at optimizing treatment strategies. In addition, the cultured isolates can supplement future gut microbiome studies by providing wet lab specimens to compare (meta)genomic information discovered within the gut microenvironment of fish.

Forecast of agri-residues generation from rice, wheat and oilseed crops in India using machine learning techniques: Exploring strategies for sustainable smart management.

Management of agri-residues generated in large quantities necessitates for its accurate estimation. Data analysis using machine learning methods can predict the agri-residues generation. The objective of the study was to forecast agri-residues generation from rice, wheat, and oilseed crops in India using ML methods and their sustainable uses. Prediction of agri-residues was done first by forecasting the crop production via the application of ML techniques for the period 2022 to 2030, and then the amount of crop residues generation calculated by multiplying the crop productions with the residues-to-product-ratio (RPR) values of the respective crops. RPR was estimated by using the gravimetric ratio of the residue to the actual crop production. The crop-specific RPR values were taken from various earlier studies in Indian context. The RPR values of 1.73 for the rice, 1.65 for wheat, and 2.6 for the oilseed crop were used as a conversion factor for residues calculation. Machine learning models linear regression, sequential minimal optimization regression (SMOreg), M5 Rule, and Gaussian process were used in the study. SMOreg performed better in models tested by coefficient of determination, root mean square error, and mean absolute error. The models predicted the generation of residues in 2030 as rice straw and husk 195.76 Mt to 277.68 Mt, wheat straw 188.62 Mt to 266.95 Mt, and oilseed stalk and oil cakes 55.61 Mt to 96.30 Mt in India. An overview of the management of agri-residues discussed. Estimation of agri-residues can provide an opportunity to utilize them with the best possible ways, lessen pollution and promote a zero-waste strategy.

Agri-residues and agro-industrial waste substrates bioconversion by fungal cultures to biocatalyst lipase for green chemistry: A review.

Huge amounts of agri-residues generated from food crops and processing are discarded in landfills, causing environmental problems. There is an urgent need to manage them with a green technological approach. Agri-residues are rich in nutrients such as proteins, lipids, sugars, minerals etc., and provide an opportunity for bioconversion into value-added products. Considering the importance of lipase as a biocatalyst for various industrial applications and its growing need for economic production, a detailed review of bioconversion of agri-residues and agro-industrial substrate for the production of lipase from fungal species from a technological perspective has been reported for the first time. Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) flow diagram was used for the identification and selection of articles from ScienceDirect, Google Scholar, and Scopus databases from 2010 to 2023 (July), and 108 peer-reviewed journal articles were included based on the scope of the study. The composition of agri-residues/agro-industrial wastes, fungal species, lipase production, industrial/green chemistry applications, and the economic impact of using agri-residues on lipase costs have been discussed. Bioconversion procedure, process developments, and technology gaps required to be addressed before commercialization have also been discussed. This process expects to decrease the environmental pollution from wastes, and low-cost lipase can help in the growth of the bioeconomy.

Photofermentative biohydrogen generation from organic acids by Rhodobacter sphaeroides O.U.001: Computational fluid dynamics modeling of hydrodynamics and temperature.

Hydrogen gas is a clean-burning fuel suitable for powering public vehicles. Hydrogen fuel has the highest energy density (143 MJ kg-1 ). This research paper emphasizes three-dimensional hydrodynamics and temperature distribution during photobiohydrogen generation by Rhodobacter sphaeroides strain O.U.001 in a triple-jacketed 1 L photobioreactor (PBR). The fermentation broth has turbulent flow conditions and light gradients among various layers, which affect the light conversion efficiency of the PBR. From the carbon source (malic acid), various organic acids are produced within fermentation (lactate, acetate, and formate). Modeling and simulation studies by computational fluid dynamics confirmed uniform fluid dynamics and heat transfer throughout the annular PBR. The modified Gompertz equation gave good simulated fitting with an experimental value for H2 generation. R. sphaeroides O.U. 001 gave good simulated results for H2 generation with mathematical modeling of substrate consumption kinetics and substrate utilization for biomass.

Improvement in Production of Rhamnolipids Using Fried Oil with Hydrophilic Co-substrate by Indigenous Pseudomonas aeruginosa NJ2 and Characterizations.

Commercialization of biosurfactant remained a challenge due to lack of structural variation and economical process using low-cost materials and low productivity. Improvement in production of biosurfactant using fried oil with hydrophilic co-substrate by an indigenous strain was studied. Microbe isolated from exhaust chimney condensate was screened for utilization of mixed carbon source and then identified as Pseudomonas aeruginosa NJ2 by 16S rDNA gene sequence. FTIR, HPLC, and NMR analyses confirmed that biosurfactant was rhamnolipids. Batch fermentation using mixed substrates improved the cell growth yield to 1.48 g/L (2.34 times) and product yield to 4.28 g/L (3.4 times) with maximum specific growth rate 0.1 h-1 (two times) and specific production rate 0.5 h-1 (13 times) due to higher cell density and direct synthesis of lipid and rhamnose moieties through central metabolic pathways of the two substrates. Increase in carrying capacity and coefficient value (two times) of logistic equation confirmed the significance of mixed substrates. The biosurfactant showed excellent surface active and thermo-chemical stability properties. Economical production of biosurfactant with high yield and productivity could be possible by isolation of mixed carbon source utilizing strain and optimization of waste substrates from oil/soapstock and sugar/corn syrup industries in media.

Production of laccase by repeated batch semi-solid fermentation using wheat straw as substrate and support for fungal growth.

Repeated batch semi-solid fermentation (sSF) process using wheat straw substrate and fungal growth of Ganoderma lucidum on solid substrate was studied for production of laccase. pH showed significant effect on laccase production. Highest laccase activity with pH controlled to 5.0 in batch sSF was 15257.2 ± 353.4 U L- 1 on 9th day. In repeated batch process at pH 5.0, insoluble biomass substrate and fungal growth were reused after liquid part of medium was replaced with glucose, ammonium phosphate (best nitrogen source) and combined glucose and ammonium phosphate solution separately. Refilled to 80% w v- 1 of initial soluble sugar of first batch resulted in highest laccase production with peak activity after 4 days from replacement. Production of enzyme increased from 15257.2 U L- 1 in first batch to cumulative 90164.4 U L- 1 in 29 days after six repeated batches, productivity increased from 1680.2 to 3110.3 U L- 1 day- 1 (∼ 1.9 times) due to reductions in inhibitory effects and time required for fungal growth. Utilization of wheat straw in repeated batch sSF was supported by composition analysis and morphological changes (scanning electron microscopy) of substrate. Economic production of laccase using agricultural residues in repeated batch sSF could be possible.

The complete mitochondrial genome sequence of Osteobrama belangeri (Cyprinidae) and its comparison with other related Cypriniformes fish species.

The complete mitogenome of Osteobrama belangeri is described using Ion Torrent (PGM sequencer), which was 16,609 bp in size comprising 13 mRNAs, teo rRNA genes, 22 tRNAs, and 926 bp as D-Loop control region, in addition to gene order and organization, being similar to most of the other related Cypriniformes fish mitogenome of NCBI databases. The all 22 tRNAs were packed into a typical clover-leaf structure. In the present study, the mitogenome has 99% similarity to the complete mitogenome sequence of O. belangeri mitogenome details previously and also would be helpful in understanding the phylogenetics, population genetics, and evolution of family Cyprinidae fishes.

Effects of wheat straw solid contents in fermentation media on utilization of soluble/insoluble nutrient, fungal growth and laccase production.

The objective of the work was to study the effect of agri-residue solid contents (2-20% w v-1) in fermentation medium on fungal growth, soluble and insoluble nutrient consumption and laccase production. Fungal strain Ganoderma lucidium and wheat straw substrate was screened for maximum laccase production. At low solid content submerged fermentation (SmF), fungus utilized mainly soluble nutrient and was unable to access the insoluble nutrient in media due to lack of contact with solid. At high solid content solid-state fermentation (SF), fungi grew on solid surface with dense and thin hyphae, utilized mainly insoluble nutrient. At medium solid content (8% w v-1) semi-solid fermentation (sSF), fungi grew on solid substrates with network of thick intercrossed hyphae, utilized both soluble and insoluble nutrients optimally resulting in highest fungal growth and laccase activity (~ 3.5 folds than in SmF and ~ 2.5 folds than in SF). Importance of soluble and insoluble nutrients was also established after isolation of their individual effects. Morphology of fungal growth (SEM), composition, thermal analysis (TGA/DTG) of substrates confirmed the results. sSF showed potential for the production of enzymes through utilization of agricultural residues as substrate.

Effect of cross linking of PVA/starch and reinforcement of modified barley husk on the properties of composite films.

Barley husk (BH) was graft copolymerized by palmitic acid. The crystalline behavior of BH decreased after grafting. Poly vinyl alcohol (PVA)/starch (St) blend film, urea formaldehyde cross linked PVA/St films and composite films containing natural BH, grafted BH were prepared separately. The effect of urea/starch ratio, content of BH and grafted BH on the mechanical properties, water uptake (%), and biodegradability of the composite films was observed. With increase in urea: starch ratio from 0 to 0.5 in the blend, tensile strength of cross linked film increased by 40.23% compared to the PVA/St film. However, in grafted BH composite film, the tensile strength increased by 72.4% than PVA/St film. The degradation rate of natural BH composite film was faster than PVA/St film. Various films were characterized by SEM, FT-IR and thermal analysis.

Immobilization of α-amylase and amyloglucosidase onto ion-exchange resin beads and hydrolysis of natural starch at high concentration.

α-Amylase was immobilized on Dowex MAC-3 with 88 % yield and amyloglucosidase on Amberlite IRA-400 ion-exchange resin beads with 54 % yield by adsorption process. Immobilized enzymes were characterized to measure the kinetic parameters and optimal operational parameters. Optimum substrate concentration and temperature were higher for immobilized enzymes. The thermal stability of the enzymes enhanced after the immobilization. Immobilized enzymes were used in the hydrolysis of the natural starch at high concentration (35 % w/v). The time required for liquefaction of starch to 10 dextrose equivalent (DE) and saccharification of liquefied starch to 96 DE increased. Immobilized enzymes showed the potential for use in starch hydrolysis as done in industry.

Preparation and cyclodextrin assisted dissolution rate enhancement of itraconazolium dinitrate salt.

The poor solubility of itraconazole (ITR) results in its variable oral absorption and bioavailability and has also proven to be a major setback in developing an efficient oral delivery system. To improve its solubility and dissolution profile, itraconazolium dinitrate salt (ITRDNT) was prepared and characterized using various spectral and thermal techniques. The morphology of the salt was studied using optical and scanning electron microscopy (SEM). Broth microdilution assay demonstrated antifungal efficacy of ITRDNT similar to ITR against four different fungal strains namely, Asparagillus fumigatus, Microsporum canis, Microsporum gypsum and Trichophyton rubrum. The salt exhibited better solubility profile than ITR in water and a number of pharmaceutical solvents. Dissolution studies revealed the total amount of drug released from ITRDNT in 3 h was four times greater than that of ITR. To further improve dissolution characteristics, the physical mixtures of ITR and ITRDNT with two cyclodextrins, ß-cyclodextrin (ß-CD) and HP-ß-cyclodextrin (HP-ß-CD) were prepared and their molar ratios were optimized. It was observed that about 75% of drug was released in 30 min from 1:3 molar ratio of ITRDNT and HP-ß-CD physical mixture, which was distinctly higher than ITR commercial capsules (70%). Owing to its facile and economical preparation and substantially better in vitro release profile, the ITRDNT and its CD physical mixtures could be better and cost effective alternatives to ITR and commercial ITR capsules.

Ditosylate salt of itraconazole and dissolution enhancement using cyclodextrins.

Salt formation has been a promising approach for improving the solubility of poorly soluble acidic and basic drugs. The aim of the present study was to prepare the salt form of itraconazole (ITZ), a hydrophobic drug to improve the solubility and hence dissolution performance. Itraconazolium ditolenesulfonate salt (ITZDITOS) was synthesized from ITZ using acid addition reaction with p-toluenesulfonic acid. Salt characterization was performed using (1)H NMR, mass spectrometry, Fourier transform infrared spectroscopy, differential scanning calorimetry, and X-ray diffraction. The particle size and morphology was studied using dynamic light scattering technique and scanning electron microscopy, respectively. The solubility of the salt in water and various pharmaceutical solvents was found multifold than ITZ. The dissolution study exhibited 5.5-fold greater percentage release value in 3 h of ITZDITOS (44.53%) as compared with ITZ (8.54%). Results of in vitro antifungal studies using broth microdilution technique indicate that ITZDITOS possessed similar antifungal profile as that of ITZ when tested against four fungal pathogens. Furthermore, the physical mixtures of ITZDITOS with two cyclodextrins, ß-cyclodextrin (ß-CD), and 2-hydroxypropyl-ß-cyclodextrin (HP-ß-CD) were prepared in different molar ratios and were evaluated for in vitro release. It was observed that in only 30 min of dissolution study, about 74 and 81% of drug was released from 1:3 molar ratios of ITZDITOS with ß-CD and ITZDITOS with HP-ß-CD, respectively, which was distinctly higher than the drug released from ITZ commercial capsules (70%). The findings warrant further preclinical and clinical studies on ITZDITOS so that it can be established as an alternative to ITZ for developing oral formulations.

Control of continuous fed-batch fermentation process using neural network based model predictive controller.

Cell growth and metabolite production greatly depend on the feeding of the nutrients in fed-batch fermentations. A strategy for controlling the glucose feed rate in fed-batch baker's yeast fermentation and a novel controller was studied. The difference between the specific carbon dioxide evolution rate and oxygen uptake rate (Qc - Qo) was used as controller variable. The controller evaluated was neural network based model predictive controller and optimizer. The performance of the controller was evaluated by the set point tracking. Results showed good performance of the controller.